Neuronal growth factors

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[edit] What to Study

  • Evidence that NGF is a target-derived survival factor.
  • Understand the major TRK signaling pathways.
  • Compare and contrast NGF/TRK, GDNF, Cytokine and TGFβ signaling mechanisms.

[edit] Flash cards

Column 1 Column 2 (memorize)
What evidence demonstrats that NGF is a neurotrophin for sympathetic and some types of sensory neurons, derived from the target tissue?
  1. Anti-NGF Ab leads to loss of sympathetic neurons
  2. Neurons that die during development survive in the presence of NGF
  3. NGF is expressed in the target tissue of sympathetic and some types of sensory neurons
  4. NGF overexpression in skin leads to increased number of sympathetic neurons
What are the classes of neurotrophin receptors?
  1. Trk receptor family
  2. p75 receptor (low affinity) - binds all neurotrophins. Not understood what it does.
Explain the development of the R7 photoreceptor in the ommatidium of the Drosophila compound eye. It depends on Boss expression by R8. The signaling pathway is: Boss (ligand) → Sevenless (receptor) → SOSdRas1.
Explain the activation mechanism for NGF / TrkA. NGFs induces dimerization and trans phosphorylation of TrkA. It provides docking sites for PTD and SH2 domain-containing proteins.
What are the pathways of TrkA (just give representative)? Shc, PLCγ, and the "?" pathway (p85/p110 of PI3K).
Give the Shc intracellular pathway of TrkA. SHC → Grb2 → SOS → Ras → Raf → MEK → (MAPK → pp90RSK : serine/threonine kinases)
Give the PLCγ intracelluar pathway of TrkA. Dehydrolysis of PIP2 into DAG and IP3. IP3 → incr. intracellular Ca2+. DAG + Ca2+ → PKC
Give the "?" intracelluar pathway of TrkA.  ? → p85 / p110(of PI3K). PI3 Kinase phosphorylates PIP2 into PIP3. PIP3 activates Akt (serine/threonine kinase).
CNTF intracellular pathway CNTF binds CNTF receptor. This leads to the recruitment of gp130/JAK, which recruits LIFRβ/JAK, and JAK is activated. Upon its activation JAK phosphorylates residues on gp130 and LIFRβ. Phosphorylated residues in LIFRβ constitute docking sites for SH2 domain of STAT3. JAK phosphorylates and activates STAT3 and activated STAT3 is translocated to the nucleus.
GDNF signals Each GDNF member binds its a preferred GFRα subunit. All GFRα receptors are GPI-anchored to lipid raft domains of the plasma membrane and are associated with the RET tyrosine kinase. The latter is multimerized and recruits a number of different signaling molecules.
What are 3 possible signaling molecules recruited by the RET tyrosine kinase of GDNF signals?
  1. Src (non-receptor tyrosine kinase) has its own targets
  2. Ret + GRB2, Sos, Ras, Raf → MEK → MAPK
  3. Ret + Shc, GRB2, PI3K → Akt
TGFβ signaling TGFβ receptor consists of two distinct dimers: type 1 dimer and type 2 dimer, which are serine/threonine kinases. Initially, TGFβ binds to the type 2 dimer and type 1 dimer is then recruited to the complex. Constitutively active type 2 dimer phosphorylates type 1 to be catalytically active. Type 1 dimer phosphorylates Smad2, which is then translocated into the nucleus.
Which GDNF member binds to what GFRα subunit? GDNF binds GFRα1, Neurturin (NRTN) binds GFRα2, Artemin (ARTN) binds GFRα3 and Persephin (PSPN) binds GFRα4

[edit] NeuroCog Lectures

[edit lecture list]

NeuroCog Lectures
Date Time Topic Instructor
Fri 10/23 1:00 Lab 3 Glia
Fri 10/30 10:45 Dendritic integration Niebur
Fri 10/30 1:00 Fundamentals of neural coding Hsiao
Mon 11/2 10:45 Correlation of neurophysiology & psychophysics Hsiao
Wed 11/4 10:45 Neural induction Marsh-Armstrong
Fri 11/6 10:45 Neural cell fate specification Gaiano
Fri 11/6 1:00 NT: In vivo recording Hsiao
Mon 11/9 10:45 Neocortical development Gaiano
Wed 11/11 10:45 Axon guidance and regeneration I Kolodkin
Wed 11/11 1:00 Inverterbrate model organisms (note: Wed afternoon class) Kolodkin
Fri 11/13 10:45 Axon guidance and regeneration II Ming
Fri 11/13 1:00 Lab 4 Embryology
Mon 11/16 10:45 Neural stem cells and adult neurogenesis Song
Mon 11/16 Mini-review II assigned
Wed 11/18 10:45 NT: gene expression analysis (note: 1.5 hour class) Blackshaw
Fri 11/20 10:45 Neuronal death during development Ginty
Fri 11/20 1:00 Lab 5 Brainstem and Spinal Cord
Mon 11/23 10:45 Neuronal growth factors Ginty
Wed 11/25 10:45 Synaptogenesis and synapse elimination Sockanathan
Thu 11/26 THANKSGIVING HOLIDAY - NO CLASS
Fri 11/27 THANKSGIVING HOLIDAY - NO CLASS
Mon 11/30 10:45 NT: protein techniques (note: 1.5 hour class) Blackshaw
Wed 12/2 10:45 Speech production, neural representation, and perception Young
Wed 12/2 1:00 NT: mouse genetic (note: Wednesday afternoon class) Zack
Fri 12/4 10:45 Sound localization Young
Fri 12/4 1:00 Lab 6 Auditory system
Mon 12/7 10:45 Neural basis of language Hillis
Mon 12/7 1:00 Mini-review II due (note: Monday afternoon class) Gaiano, Marsh-Armstrong
Wed 12/9 10:45 Mechanotransduction by the inner ear Fuchs
Fri 12/11 10:45 Bird song lecture Ball
Fri 12/11 1:00 Central auditory processing Wang
Mon 12/14 10:45 Synaptic signaling in the cochlea Fuchs
Wed 12/16 10:45 REVIEW SESSION TAs
Fri 12/18 9:00 FINAL EXAM (Material 10/27 - 12/17)
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